rs1016343
| Orientation | plus |
| Stabilized | plus |
| Make rs1016343(C;C) |
| Make rs1016343(C;T) |
| Make rs1016343(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 8 |
| Position | 127081052 |
| Gene | PCAT2, PRNCR1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1016343 |
| dbSNP (classic) | rs1016343 |
| ClinGen | rs1016343 |
| ebi | rs1016343 |
| HLI | rs1016343 |
| Exac | rs1016343 |
| Gnomad | rs1016343 |
| Varsome | rs1016343 |
| LitVar | rs1016343 |
| Map | rs1016343 |
| PheGenI | rs1016343 |
| Biobank | rs1016343 |
| 1000 genomes | rs1016343 |
| hgdp | rs1016343 |
| ensembl | rs1016343 |
| geneview | rs1016343 |
| scholar | rs1016343 |
| rs1016343 | |
| pharmgkb | rs1016343 |
| gwascentral | rs1016343 |
| openSNP | rs1016343 |
| 23andMe | rs1016343 |
| SNPshot | rs1016343 |
| SNPdbe | rs1016343 |
| MSV3d | rs1016343 |
| GWAS Ctlg | rs1016343 |
| GMAF | 0.2149 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
cancer-genetics these snps influence genetic risk for prostate cancer
- the haplotype rs6983267 rs1016343 rs4242384
- rs7501939
- rs1859962
- rs2660753
- rs9364554
- rs6465657
- rs10993994
- rs7931342
- rs2735839
- rs5945619
- rs10993994
| GWAS snp | |
|---|---|
| PMID | [PMID 18264097] |
| Trait | Prostate cancer |
| Title | Multiple newly identified loci associated with prostate cancer susceptibility |
| Risk Allele | T |
| P-val | 9.9999999999999995E-8 |
| Odds Ratio | 1.37 [NR] |
[PMID 19866473
] Association of 17 prostate cancer susceptibility loci with prostate cancer risk in Chinese men
| GWAS snp | |
|---|---|
| PMID | [PMID 21743057]
|
| Trait | |
| Title | Genome-wide association study identifies new prostate cancer susceptibility loci. |
| Risk Allele | T |
| P-val | 4E-10 |
| Odds Ratio | 1.3100 [1.20-1.42] |
[PMID 22733159] Analysis of prostate cancer association with four single-nucleotide polymorphisms from genome-wide studies and serum phyto-estrogen concentrations
[PMID 18483343] Multiple independent genetic variants in the 8q24 region are associated with prostate cancer risk.
[PMID 18535017] Pooled analysis of genetic variation at chromosome 8q24 and colorectal neoplasia risk.
[PMID 19549807] Prostate cancer risk associated loci in African Americans.
[PMID 20039378] Estimation of genotype relative risks from pedigree data by retrospective likelihoods.
[PMID 20690139] Meta-analysis of genome-wide and replication association studies on prostate cancer.
[PMID 21390317] Characterizing associations and SNP-environment interactions for GWAS-identified prostate cancer risk markers--results from BPC3.
[PMID 24779299] Study of genetic variants of 8q21 and 8q24 associated with prostate cancer in Jing-Jin residents in northern China
[PMID 29266682] Profile of common prostate cancer risk variants in an unscreened Romanian population.
[PMID 31487296] Association between polymorphisms in PRNCR1 and risk of colorectal cancer in the Saudi population.
