rs9891572

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(C;C)	0
(T;T)		Increased HDL

Make rs9891572(C;T)

Reference

GRCh38 38.1/141

Chromosome

17

Position

2525214

is a	snp
is	mentioned by
dbSNP	rs9891572
dbSNP (classic)	rs9891572
ClinGen	rs9891572
ebi	rs9891572
HLI	rs9891572
Exac	rs9891572
Gnomad	rs9891572
Varsome	rs9891572
LitVar	rs9891572
Map	rs9891572
PheGenI	rs9891572
Biobank	rs9891572
1000 genomes	rs9891572
hgdp	rs9891572
ensembl	rs9891572
geneview	rs9891572
scholar	rs9891572
google	rs9891572
pharmgkb	rs9891572
gwascentral	rs9891572
openSNP	rs9891572
23andMe	rs9891572
SNPshot	rs9891572
SNPdbe	rs9891572
MSV3d	rs9891572
GWAS Ctlg	rs9891572

GMAF

0.2029

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

per the 23andMe blog, the minor allele of this SNP (T) was associated with increased HDL cholesterol

SNP	Rarer allele	LDL	HDL	TG
rs6544713	T	+
rs2650000	A	+
rs471364	C		-
rs1800961	T		-
rs7679	C		-	+
rs2967605	T		-
rs2409722	T			-
rs10903129	A	-	-	-
rs6756629	A	-	+	-
rs12670798	C	+	+	+
rs7395662	A	-	+	+
rs174570	T	-	-	+
rs2271293	A	-	+	-
rs2624265	C			+
rs2167079	T		+
rs9891572	T		+
rs4844614	T	+
rs5031002	G	+

GWAS snp
PMID	[PMID 19060910]
Trait	HDL cholesterol
Title	Genome-wide association analysis of metabolic traits in a birth cohort from a founder population
Risk Allele	A
P-val	2E-7
Odds Ratio	0.05 [0.048-0.051] mmol/l increase